x
Category: DNA microarray software
Go to TM4 suite Add to my favouritesMore informations
Category: Cancer etiology
Go to Report on Carcinogens (NTP) Add to my favouritesMore informations
Category: Biomedical communities
Go to BioCrowd Add to my favouritesMore informations
Category: Genomics software
Go to Circos Add to my favouritesMore informations
Category: Biomedical funding and jobs
Go to Cambridge Jobs Add to my favouritesMore informations
Category: DNA microarray software
Go to Gene Set Enrichm Analysis (GSEA) Add to my favouritesMore informations
Category: System biology software
Go to MAGNet Add to my favouritesMore informations
Category: Genomics software
Go to Galaxy Add to my favouritesMore informations
Category: Sequencing and assembly software
Go to Cufflinks Add to my favouritesMore informations
Category: Sequencing and assembly software
Go to RDXplorer Add to my favouritesMore informations
Category: Sequencing and assembly software
Go to FusionSeq Add to my favouritesMore informations
Category: Sequencing and assembly software
Go to TopHat Add to my favouritesMore informations
Category: Sequencing and assembly software
Go to SAMtools Add to my favouritesMore informations
Category: Sequencing and assembly software
Go to Genome Analysis Toolkit - GATK Add to my favouritesMore informations
Category: Other software
Go to QuikChange Primer Design Add to my favouritesMore informations
Category: Gene information search, DNA sequencing
Go to GeneProf Add to my favouritesMore informations
Category: Calculators and converters
Go to Expasy Translate Add to my favouritesMore informations
Category: Sequencing and assembly software
Go to Burrows-Wheeler Aligner (BWA) Add to my favouritesMore informations
Category: Other software
Go to AddGene.org Add to my favouritesMore informations
Category: 2 DNA sequences alignment
Go to BLASTN Add to my favouritesMore informations
TM4 suite: a software for analyzing data from microarray experiments
TM4 is a suite of open source software tools (MADAM TIGR MIDAS MeV) that manage and analyze data from microarray experiments.
Category: DNA microarray software
Report on Carcinogens (NTP)
Report on Carcinogens, U.S. Department of Health and Human Services, Public Health Service, National Toxicology Program .
Category: Cancer etiology
BioCrowd: an online community for bioprofessionals
BioCrowd.com is a new social network for bioscientists (and others in the life sciences) who wish to connect with others to advance, promote or shape their careers.
Category: Biomedical communities
Circos
Circos is a software package for visualizing data and information. It visualizes data in a circular layout — this makes Circos ideal for exploring relationships between objects or positions. Although originally designed for visualizing genomic data...
Category: Genomics software
Cambridge Jobs
Here you can view the current vacancies and find all of the information you need about working for the University of Cambridge, UK
Category: Biomedical funding and jobs
Gene Set Enrichm Analysis (GSEA)
The GSEA algorithm implemented in MeV is a computational method that determines whether an a priori defined set of genes shows statistically significant, concordant differences between two biological states (e.g. phenotypes). GSEA software uses the M...
Category: DNA microarray software
MAGNet
The Center for the Multiscale Analysis of Genomic and Cellular Networks (MAGNet) develops novel Structural and Systems Biology methods and tools for the dissection of molecular interactions in the cell and for the interaction-based elucidation of cel...
Category: System biology software
Galaxy
Galaxy is an open, web-based platform for data intensive biomedical research, now available as a "cloud computing" resource Whether on this free public server or your own instance, you can perform, reproduce, and share complete analyses.
Category: Genomics software
Cufflinks
Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then...
Category: Sequencing and assembly software
RDXplorer
The RDXplorer (Read Depth eXplorer) is a computational tool based on LINUX/UNIX/MAC OS X for copy number variants (CNV) detection in whole human genome sequence data using read depth (RD) coverage. It requires SAMtools and Python programming language...
Category: Sequencing and assembly software
FusionSeq
FusionSeq programs are written in C and constitute a tri-modular computational framework to detect fusion transcripts from paired-end RNA-sequencing.
Category: Sequencing and assembly software
TopHat
TopHat is a Linux or OS X program that aligns RNA-Seq reads to a genome in order to identify exon-exon splice junctions. It is designed to work with reads produced by the Illumina Genome Analyzer, although it was successful used with reads from other...
Category: Sequencing and assembly software
SAMtools
SAMtools provide various utilities for manipulating alignments in the Sequence Alignment/Map (SAM) format, including sorting, merging, indexing and generating alignments in a per-position format.
Category: Sequencing and assembly software
Genome Analysis Toolkit - GATK
GATK is a structured programming framework designed to enable rapid development of efficient and robust analysis tools for next-generation DNA sequencers and second it's a suite of tools for working with human medical resequencing projects such as 10...
Category: Sequencing and assembly software
QuikChange Primer Design
The QuikChange® Primer Design Program supports mutagenic primer design mutagenesis experiments. Using primer design guidelines described in QuikChange manuals, this program calculates/designs the appropriate primer sequences with the optimal melting...
Category: Other software
GeneProf
GeneProf is a web-based, graphical software suite that allows users either to quickly access public information on genes or to analyze data produced using next-generation sequencing platforms. GeneProf simplifies the construction of complex workflows...
Category: Gene information search, DNA sequencing
Expasy Translate
Expasy Translate is a tool which allows the translation of a nucleotide (DNA/RNA) sequence to a protein sequence.
Category: Calculators and converters
Burrows-Wheeler Aligner (BWA)
BWA is a program for aligning sequencing reads against a large reference genome (e.g. human genome). It has two major components, one for read shorter than 150bp and the other for longer reads.
Category: Sequencing and assembly software
AddGene.org
Addgene is a non-profit plasmid repository dedicated to helping academic scientists around the world share high-quality plasmids.
Category: Other software
BLASTN: search nucleotide subjects using a nucleotide query
BLAST nucleotide (BLASTN) searches nucleotide subjects using a nucleotide query.
Category: 2 DNA sequences alignment
