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DNA or genome alignment and visualization tool based on blastz alignment program. Alignments can be automatically submitted to rVista 2.0 to identify evolutionary conserved transcription factor binding sites. Registration not required.
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The HUGO Gene Nomenclature Committee (HGNC) has assigned unique gene symbols and names to over 33,000 human loci, of which around 19,000 are protein coding. http://genenames.org is a curated online repository of HGNC-approved gene nomenclature and associated resources including links to genomic, proteomic and phenotypic information, as well as dedicated gene family pages. Registration not required.
Click here for more informationsCompute post test probability, Multiple comparisons correction Registration not required.
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FOLDALIGN is an algorithm for local or global simultaneous folding and aligning two or more RNA sequences and is based on the Sankoffs algorithm (SIAM J. Appl. Math., 45:810-825, 1985). Foldalign can make pairwise local or global alignments and structure predictions. FoldalignM makes a multiple global alignment and structure prediction. Registration not required.
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With more than 900,000 human-edited definitions, Acronym Finder is a largest dictionary of acronyms, abbreviations, and initialisms. Combined with the Acronym Attic, Acronym Finder contains more than 4 million acronyms and abbreviations. Registration not required.
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I-TASSER server is a web application for protein structure and function predictions. Models are built based on multiple-threading alignments by LOMETS and iterative TASSER simulations. I-TASSER (as 'Zhang-Server') was ranked as the No 1 server in recent CASP7 and CASP8 experiments. The server is in active development with the goal to provide accurate structural and function predictions using state-of-the-art algorithms. References: Ambrish Roy, Alper Kucukural, Yang Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, vol 5, 725-738 (2010). Registration not required.
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Category: Gene information search, Gene expression
WashU Human Epigenome Browser allows: Epigenome
The browser currently hosts Human (and other species) Epigenome Atlas data produced by the Roadmap Epigenomics project,but lets users diverge from the strict genome-centric view of the UCSC browser to, for instance, view all genes (or promoters, or 3’ UTRs) in a given pathway side by side. “You can do lots of Google Maps-style operations, and you can look at your data in the context of their metadata.
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Category: Biomedical protocols
Protocol Exchange allows: to discover protocols, to share protocols, to comment on protocols, to organize your favorites protocols
Protocol Exchange from Nature Protocols is an open resource where the community of scientists pool their experimental know-how to help accelerate research. Discover the protocols, share a protocol, join a lab group, comment on protocols, organize your favorites and personalize your experience. Registration not required.
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Calculate volumes and dilutions using both % and molar Registration not required.
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R is a free software environment for statistical computing and graphics. It compiles and runs on a wide variety of UNIX platforms, Windows and MacOS Registration not required.
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EMBO Fellowships fund and support young scientists in their pursuit of both pre- and post-doctoral research. Registration not required.
Click here for more informationsOverlapping Primers creates multiple overlapping PCR products in one sequence. Registration not required.
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Click here for more informationsDistributions: Binomial, Normal, Student's T, Chi Square, Fisher's F Registration not required.
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Biomedical search tools
Online genomic tools
Online proteomics tools
Calculators
Biomedical lab tools
Scientific writing/reading
Biomedical communities
Biomedical funding and jobs
Medical topics
Biomedical softwares