NOVELTIES
The genome-wide association study (GWAS) publications listed in this catalog establish genetic associations between hundreds of genomic loci and complex (multigenic)traits, many of them diseases. Only those attempting to assay at least 100,000 single nucleotide polymorphisms (SNPs) in the initial stage, are included here. Registration not required.
Click here for more informationsPublished on 2011-02-10 11:58:17
BRB-ArrayTools is an integrated package for the visualization and statistical analysis of DNA microarray gene expression data.The array tools package utilizes an Excel front end. Registration not required.
Click here for more informationsPublished on 2011-02-03 09:46:07
ProSight Lite is a free Windows application for matching a single candidate protein sequence and its modifications against a set of mass spectrometric observations. Registration required.
Click here for more informationsPublished on 2011-01-31 10:27:32
This page analyzes survival-time data by the method of Proportional Hazards regression (Cox). Given survival times, final status (alive or dead), and one or more covariates, it produces a baseline survival curve and covariate coefficient estimates with their standard errors, confidence intervals, and significance levels. Registration not required.
Click here for more informationsPublished on 2011-01-19 04:28:08
This page performs logistic regression, in which a dichotomous outcome is predicted by one or more variables. The program generates the coefficients of a prediction formula, and odds ratios. Data can be copied and pasted from files. Registration not required.
Click here for more informationsPublished on 2011-01-19 04:25:41
This online program helps to evaluate the quantity of primers and nucleotides for optimal PCR reaction and the necessary number of cycles. Registration not required.
Click here for more informationsPublished on 2011-01-18 10:44:39
The Arabidopsis Gene Regulatory Information Server (AGRIS) is an information resource of Arabidopsis promoter sequences, transcription factors and their target genes. AGRIS provides a comprehensive resource for gene regulatory studies in the model plant Arabidopsis thalian through the access to three interlinked databases, AtTFDB, AtcisDB and AtRegNet. Registration not required.
Click here for more informationsPublished on 2011-01-18 10:32:08
General information on various cancer topics Registration not required.
Click here for more informationsPublished on 2011-01-14 11:33:19
The Pancreatic Expression database is a major component of the EU project MolDiag-Paca, whose mission is to bring together leading groups in European pancreatic cancer research from academia and industry to develop novel molecular diagnostic tools for the prevention and diagnosis of pancreatic cancer. Registration not required.
Click here for more informationsPublished on 2011-01-14 11:32:40
COXPRESdb (coexpressed gene database) represents the coexpression relationship for human, mouse, rat, chicken, zebrafish, fly and nematoda. COXPRESdb can help researchers to clarify the functional and regulatory networks of genes in a broad array of animal species. Registration not required.
Click here for more informationsPublished on 2011-01-14 11:29:54
VnD (Variations and Drugs)is a consolidated database containing information on diseases, disease and drug related genes, genetic variations, protein structures, and drug information, to understand the trilateral relationship among genomic variations, diseases, and drugs. Registration not required.
Click here for more informationsPublished on 2011-01-14 10:16:22
dbCRID is a curated database of human chromosome rearrangements and associated diseases Registration not required.
Click here for more informationsPublished on 2011-01-14 09:56:36
SPIKE (Signaling Pathways Integrated Knowledge Enginestore, stores, organizes and allows retrieval of pathway information (A Paz et .a, Nucleic Acid Res 39, D793, 2011). Registration not required.
Click here for more informationsPublished on 2011-01-14 05:48:38
The Worldwide Protein Data Bank (wwPDB) consists of organizations that act as deposition, data processing and distribution centers for PDB data. The founding members are RCSB PDB (USA), PDBe (Europe) and PDBj (Japan) whic act as data deposition, processing and distribution centers for PDB data (RP Josten et al, Nucleic Acid Res 39, D411, 2011). Registration not required.
Click here for more informationsPublished on 2011-01-13 11:50:03
ASPicDB is a database designed to provide access to reliable annotations of the alternative splicing pattern of human genes, obtained by ASPic algorithm, and to the functional annotation of predicted isoforms (Martelli et al., Nucleic Acids Res 39:D80, 2011) Registration not required.
Click here for more informationsPublished on 2011-01-11 12:28:24
NONCODE is a database of all kinds of noncoding RNAs (except tRNAs and rRNAs). Registration not required.
Click here for more informationsPublished on 2011-01-08 05:53:44
The ICGC Goal is to obtain a comprehensive description of genomic, transcriptomic and epigenomic changes in 50 different tumor types and/or subtypes which are of clinical and societal importance across the globe. ICGC has been organized as an international effort to harmonize the large number of projects that are now, or shortly will be, underway that have the common aim of elucidating comprehensively the genomic changes present in many forms of cancer. Registration not required.
Click here for more informationsPublished on 2011-01-07 06:17:06
The HIV databases contain data on HIV genetic sequences, immunological epitopes, drug resistance-associated mutations, and vaccine trials. Registration not required.
Click here for more informationsPublished on 2011-01-06 13:27:42
The National Human Genome Research Institute (NHGRI) model organism ENCyclopedia Of DNA Elements (modENCODE) Project will try to identify all of the sequence-based functional elements and the genome-wide patterns of regulatory interactions in the Caenorhabditis elegans and Drosophila melanogaster genome. Registration not required.
Click here for more informationsPublished on 2011-01-03 05:15:37
The Database for Annotation, Visualization and Integrated Discovery (DAVID ) v6.8 comprises a full Knowledgebase update to the sixth version of our original web-accessible programs. DAVID now provides a comprehensive set of functional annotation tools for investigators to understand biological meaning behind large list of genes.
Click here for more informationsPublished on 2010-12-29 04:12:22
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